Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav8d-1Q5R1H8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Gm5408-201ENSMUST00000197998 747 ntBASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav8d-1Q5R1H8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8d-1Q5R1H8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8d-1Q5R1H8 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8d-1Q5R1H8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms