Protein–RNA interactions for Protein: Q3UV71

Tmtc1, Transmembrane and TPR repeat-containing protein 1, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmtc1Q3UV71 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tmtc1Q3UV71 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmtc1Q3UV71 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmtc1Q3UV71 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.27■□□□□ 0.52
Tmtc1Q3UV71 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmtc1Q3UV71 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Tmtc1Q3UV71 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmtc1Q3UV71 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tmtc1Q3UV71 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tmtc1Q3UV71 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.27■□□□□ 0.51
Tmtc1Q3UV71 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Gm12933-201ENSMUST00000120203 872 ntBASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Gm29257-201ENSMUST00000186115 639 ntBASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Gm37179-201ENSMUST00000194862 823 ntBASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tmtc1Q3UV71 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Gm11249-201ENSMUST00000117071 859 ntBASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmtc1Q3UV71 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmtc1Q3UV71 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmtc1Q3UV71 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Tmtc1Q3UV71 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmtc1Q3UV71 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.22■□□□□ 0.51
Tmtc1Q3UV71 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.22■□□□□ 0.51
Tmtc1Q3UV71 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmtc1Q3UV71 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Tmtc1Q3UV71 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmtc1Q3UV71 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms