Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Gm37722-201ENSMUST00000193757 208 ntBASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Birc2-201ENSMUST00000054878 378 ntBASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tmem88bQ3TYP4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tmem88bQ3TYP4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.18□□□□□ -0.14
Tmem88bQ3TYP4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Mir8098-201ENSMUST00000184011 137 ntBASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tmem88bQ3TYP4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tmem88bQ3TYP4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms