Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.18□□□□□ -0.14
Trim63Q38HM4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim63Q38HM4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.17□□□□□ -0.14
Trim63Q38HM4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.16□□□□□ -0.14
Trim63Q38HM4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim63Q38HM4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Trim63Q38HM4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Trim63Q38HM4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim63Q38HM4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim63Q38HM4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms