Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.71■□□□□ 0.43
IhhP97812 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IhhP97812 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.7■□□□□ 0.42
IhhP97812 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.7■□□□□ 0.42
IhhP97812 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IhhP97812 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.69■□□□□ 0.42
IhhP97812 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.69■□□□□ 0.42
IhhP97812 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IhhP97812 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IhhP97812 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.68■□□□□ 0.42
IhhP97812 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
IhhP97812 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
IhhP97812 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Gm27389-201ENSMUST00000183622 195 ntBASIC17.68■□□□□ 0.42
IhhP97812 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
IhhP97812 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IhhP97812 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IhhP97812 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.67■□□□□ 0.42
IhhP97812 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.67■□□□□ 0.42
IhhP97812 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.67■□□□□ 0.42
IhhP97812 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.67■□□□□ 0.42
IhhP97812 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IhhP97812 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IhhP97812 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IhhP97812 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.67■□□□□ 0.42
IhhP97812 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
IhhP97812 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
IhhP97812 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IhhP97812 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IhhP97812 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
IhhP97812 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.66■□□□□ 0.42
IhhP97812 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
IhhP97812 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 AA414768-201ENSMUST00000121924 1257 ntBASIC17.66■□□□□ 0.42
IhhP97812 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.66■□□□□ 0.42
IhhP97812 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.66■□□□□ 0.42
IhhP97812 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.66■□□□□ 0.42
IhhP97812 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
IhhP97812 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.66■□□□□ 0.42
IhhP97812 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IhhP97812 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
IhhP97812 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IhhP97812 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IhhP97812 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.65■□□□□ 0.42
IhhP97812 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IhhP97812 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
IhhP97812 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
IhhP97812 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IhhP97812 Gm37722-201ENSMUST00000193757 208 ntBASIC17.65■□□□□ 0.42
IhhP97812 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IhhP97812 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IhhP97812 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms