Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Usp9xP70398 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp9xP70398 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp9xP70398 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp9xP70398 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Usp9xP70398 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.11□□□□□ -0.15
Usp9xP70398 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usp9xP70398 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp9xP70398 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Usp9xP70398 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Usp9xP70398 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.1□□□□□ -0.15
Usp9xP70398 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp9xP70398 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp9xP70398 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.1□□□□□ -0.15
Usp9xP70398 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Usp9xP70398 Chchd1-203ENSMUST00000224633 557 ntBASIC14.1□□□□□ -0.15
Usp9xP70398 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp9xP70398 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Gm7230-201ENSMUST00000173026 815 ntBASIC14.09□□□□□ -0.15
Usp9xP70398 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.09□□□□□ -0.15
Usp9xP70398 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp9xP70398 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp9xP70398 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp9xP70398 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Usp9xP70398 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp9xP70398 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.09□□□□□ -0.15
Usp9xP70398 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp9xP70398 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp9xP70398 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Usp9xP70398 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Usp9xP70398 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Usp9xP70398 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp9xP70398 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp9xP70398 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp9xP70398 Gm15165-201ENSMUST00000118140 502 ntBASIC14.08□□□□□ -0.16
Usp9xP70398 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Usp9xP70398 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp9xP70398 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp9xP70398 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.08□□□□□ -0.16
Usp9xP70398 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Usp9xP70398 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Usp9xP70398 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp9xP70398 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp9xP70398 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp9xP70398 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp9xP70398 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.07□□□□□ -0.16
Usp9xP70398 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp9xP70398 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp9xP70398 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp9xP70398 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp9xP70398 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms