Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Cacnb3P54285 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cacnb3P54285 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Cacnb3P54285 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cacnb3P54285 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.87■□□□□ 0.77
Cacnb3P54285 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.87■□□□□ 0.77
Cacnb3P54285 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cacnb3P54285 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.87■□□□□ 0.77
Cacnb3P54285 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 Birc2-201ENSMUST00000054878 378 ntBASIC19.87■□□□□ 0.77
Cacnb3P54285 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Cacnb3P54285 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cacnb3P54285 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cacnb3P54285 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Cacnb3P54285 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.86■□□□□ 0.77
Cacnb3P54285 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.86■□□□□ 0.77
Cacnb3P54285 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.86■□□□□ 0.77
Cacnb3P54285 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cacnb3P54285 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cacnb3P54285 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.86■□□□□ 0.77
Cacnb3P54285 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cacnb3P54285 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.85■□□□□ 0.77
Cacnb3P54285 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Cacnb3P54285 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.85■□□□□ 0.77
Cacnb3P54285 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.85■□□□□ 0.77
Cacnb3P54285 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.85■□□□□ 0.77
Cacnb3P54285 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cacnb3P54285 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cacnb3P54285 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cacnb3P54285 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cacnb3P54285 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacnb3P54285 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.84■□□□□ 0.77
Cacnb3P54285 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacnb3P54285 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.84■□□□□ 0.77
Cacnb3P54285 Gm5864-201ENSMUST00000202263 970 ntBASIC19.84■□□□□ 0.77
Cacnb3P54285 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cacnb3P54285 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacnb3P54285 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.84■□□□□ 0.77
Cacnb3P54285 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cacnb3P54285 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb3P54285 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb3P54285 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb3P54285 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb3P54285 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb3P54285 Gm12895-201ENSMUST00000122214 226 ntBASIC19.83■□□□□ 0.77
Cacnb3P54285 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb3P54285 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.83■□□□□ 0.77
Cacnb3P54285 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Cacnb3P54285 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.83■□□□□ 0.77
Cacnb3P54285 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb3P54285 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cacnb3P54285 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.83■□□□□ 0.76
Cacnb3P54285 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacnb3P54285 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacnb3P54285 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacnb3P54285 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cacnb3P54285 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms