Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Atxn1P54254 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Atxn1P54254 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Gm18206-201ENSMUST00000207027 926 ntBASIC16.89■□□□□ 0.29
Atxn1P54254 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Atxn1P54254 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atxn1P54254 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.89■□□□□ 0.29
Atxn1P54254 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Atxn1P54254 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Atxn1P54254 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Atxn1P54254 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.88■□□□□ 0.29
Atxn1P54254 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atxn1P54254 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Atxn1P54254 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Atxn1P54254 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Atxn1P54254 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Mir770-201ENSMUST00000103252 94 ntBASIC16.87■□□□□ 0.29
Atxn1P54254 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Atxn1P54254 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.87■□□□□ 0.29
Atxn1P54254 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.87■□□□□ 0.29
Atxn1P54254 Gm43347-201ENSMUST00000200226 580 ntBASIC16.87■□□□□ 0.29
Atxn1P54254 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.87■□□□□ 0.29
Atxn1P54254 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atxn1P54254 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Atxn1P54254 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Olfr129-201ENSMUST00000122318 993 ntBASIC16.86■□□□□ 0.29
Atxn1P54254 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.86■□□□□ 0.29
Atxn1P54254 Gm26039-201ENSMUST00000158152 144 ntBASIC16.86■□□□□ 0.29
Atxn1P54254 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Atxn1P54254 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Atxn1P54254 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Atxn1P54254 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Atxn1P54254 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.85■□□□□ 0.29
Atxn1P54254 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.85■□□□□ 0.29
Atxn1P54254 Gm11452-201ENSMUST00000122376 690 ntBASIC16.85■□□□□ 0.29
Atxn1P54254 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.85■□□□□ 0.29
Atxn1P54254 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.85■□□□□ 0.29
Atxn1P54254 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.85■□□□□ 0.29
Atxn1P54254 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.85■□□□□ 0.29
Atxn1P54254 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Atxn1P54254 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Atxn1P54254 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.85■□□□□ 0.29
Atxn1P54254 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Atxn1P54254 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Atxn1P54254 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms