Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli1P47806 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.66■□□□□ 0.26
Gli1P47806 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli1P47806 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli1P47806 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli1P47806 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Gli1P47806 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gli1P47806 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.65■□□□□ 0.26
Gli1P47806 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Gli1P47806 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.65■□□□□ 0.26
Gli1P47806 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gli1P47806 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gli1P47806 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gli1P47806 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gli1P47806 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gli1P47806 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Gli1P47806 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Gli1P47806 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gli1P47806 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gli1P47806 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.64■□□□□ 0.25
Gli1P47806 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.64■□□□□ 0.25
Gli1P47806 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.64■□□□□ 0.25
Gli1P47806 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.64■□□□□ 0.25
Gli1P47806 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.64■□□□□ 0.25
Gli1P47806 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gli1P47806 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.63■□□□□ 0.25
Gli1P47806 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.63■□□□□ 0.25
Gli1P47806 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.63■□□□□ 0.25
Gli1P47806 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Gli1P47806 Mir1199-201ENSMUST00000117015 119 ntBASIC16.63■□□□□ 0.25
Gli1P47806 Gm11643-201ENSMUST00000119578 864 ntBASIC16.63■□□□□ 0.25
Gli1P47806 Gm13158-201ENSMUST00000122007 736 ntBASIC16.63■□□□□ 0.25
Gli1P47806 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.63■□□□□ 0.25
Gli1P47806 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.63■□□□□ 0.25
Gli1P47806 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Gli1P47806 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.63■□□□□ 0.25
Gli1P47806 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.63■□□□□ 0.25
Gli1P47806 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Gli1P47806 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gli1P47806 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli1P47806 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Gli1P47806 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli1P47806 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gli1P47806 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli1P47806 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.62■□□□□ 0.25
Gli1P47806 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.62■□□□□ 0.25
Gli1P47806 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Gli1P47806 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.62■□□□□ 0.25
Gli1P47806 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli1P47806 Gm9987-201ENSMUST00000069768 567 ntBASIC16.62■□□□□ 0.25
Gli1P47806 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gli1P47806 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gli1P47806 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms