Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.34□□□□□ -0.11
Mmp9P41245 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mmp9P41245 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mmp9P41245 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mmp9P41245 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp9P41245 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp9P41245 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp9P41245 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp9P41245 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Mmp9P41245 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp9P41245 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Mmp9P41245 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.33□□□□□ -0.12
Mmp9P41245 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Mmp9P41245 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.33□□□□□ -0.12
Mmp9P41245 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.33□□□□□ -0.12
Mmp9P41245 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp9P41245 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Mmp9P41245 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.32□□□□□ -0.12
Mmp9P41245 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mmp9P41245 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Gm13146-201ENSMUST00000118508 780 ntBASIC14.32□□□□□ -0.12
Mmp9P41245 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.32□□□□□ -0.12
Mmp9P41245 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Mmp9P41245 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mmp9P41245 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp9P41245 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Mmp9P41245 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Mmp9P41245 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mmp9P41245 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.31□□□□□ -0.12
Mmp9P41245 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Gm13534-201ENSMUST00000121169 513 ntBASIC14.31□□□□□ -0.12
Mmp9P41245 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Mmp9P41245 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.31□□□□□ -0.12
Mmp9P41245 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.31□□□□□ -0.12
Mmp9P41245 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Mmp9P41245 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp9P41245 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms