Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm27275-201ENSMUST00000184318 272 ntBASIC16.04■□□□□ 0.16
Sox6P40645 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.04■□□□□ 0.16
Sox6P40645 Gm37856-201ENSMUST00000191634 999 ntBASIC16.04■□□□□ 0.16
Sox6P40645 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.04■□□□□ 0.16
Sox6P40645 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox6P40645 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox6P40645 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox6P40645 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox6P40645 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox6P40645 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox6P40645 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox6P40645 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Sox6P40645 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox6P40645 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox6P40645 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.03■□□□□ 0.16
Sox6P40645 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox6P40645 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox6P40645 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sox6P40645 Gm11249-201ENSMUST00000117071 859 ntBASIC16.03■□□□□ 0.16
Sox6P40645 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox6P40645 Gm20760-201ENSMUST00000179197 648 ntBASIC16.03■□□□□ 0.16
Sox6P40645 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.03■□□□□ 0.16
Sox6P40645 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox6P40645 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox6P40645 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox6P40645 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.03■□□□□ 0.16
Sox6P40645 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox6P40645 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sox6P40645 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sox6P40645 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.02■□□□□ 0.16
Sox6P40645 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Sox6P40645 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.02■□□□□ 0.16
Sox6P40645 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.02■□□□□ 0.16
Sox6P40645 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox6P40645 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sox6P40645 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.02■□□□□ 0.15
Sox6P40645 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox6P40645 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Sox6P40645 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.01■□□□□ 0.15
Sox6P40645 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sox6P40645 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.01■□□□□ 0.15
Sox6P40645 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Sox6P40645 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox6P40645 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.01■□□□□ 0.15
Sox6P40645 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Sox6P40645 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Hivep3-201ENSMUST00000084306 2973 ntBASIC16■□□□□ 0.15
Sox6P40645 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Sox6P40645 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16■□□□□ 0.15
Sox6P40645 Gm13158-201ENSMUST00000122007 736 ntBASIC16■□□□□ 0.15
Sox6P40645 Gm10653-202ENSMUST00000139570 835 ntBASIC16■□□□□ 0.15
Sox6P40645 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Sox6P40645 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sox6P40645 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sox6P40645 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sox6P40645 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms