Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a13P31649 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc6a13P31649 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a13P31649 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.31■□□□□ 0.36
Slc6a13P31649 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Slc6a13P31649 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a13P31649 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a13P31649 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a13P31649 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a13P31649 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Slc6a13P31649 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc6a13P31649 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a13P31649 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a13P31649 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Slc6a13P31649 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.3■□□□□ 0.36
Slc6a13P31649 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.3■□□□□ 0.36
Slc6a13P31649 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a13P31649 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a13P31649 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slc6a13P31649 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.3■□□□□ 0.36
Slc6a13P31649 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a13P31649 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc6a13P31649 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.29■□□□□ 0.36
Slc6a13P31649 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Slc6a13P31649 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc6a13P31649 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a13P31649 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a13P31649 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a13P31649 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.28■□□□□ 0.36
Slc6a13P31649 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Slc6a13P31649 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Slc6a13P31649 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc6a13P31649 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Slc6a13P31649 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a13P31649 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a13P31649 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Slc6a13P31649 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a13P31649 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a13P31649 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a13P31649 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.27■□□□□ 0.36
Slc6a13P31649 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.27■□□□□ 0.36
Slc6a13P31649 Gm7370-201ENSMUST00000219471 767 ntBASIC17.27■□□□□ 0.36
Slc6a13P31649 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a13P31649 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Slc6a13P31649 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a13P31649 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Slc6a13P31649 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Slc6a13P31649 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.27■□□□□ 0.35
Slc6a13P31649 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a13P31649 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a13P31649 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a13P31649 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a13P31649 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.26■□□□□ 0.35
Slc6a13P31649 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc6a13P31649 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.26■□□□□ 0.35
Slc6a13P31649 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a13P31649 Gm18958-201ENSMUST00000174258 762 ntBASIC17.26■□□□□ 0.35
Slc6a13P31649 Gm7889-201ENSMUST00000185591 958 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms