Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr2aP08775 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr2aP08775 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr2aP08775 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Polr2aP08775 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr2aP08775 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr2aP08775 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.46■□□□□ 0.71
Polr2aP08775 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr2aP08775 Gm23935-201ENSMUST00000102303 57 ntBASIC19.46■□□□□ 0.71
Polr2aP08775 Gm24270-201ENSMUST00000102326 57 ntBASIC19.46■□□□□ 0.71
Polr2aP08775 Gm24245-201ENSMUST00000157318 57 ntBASIC19.46■□□□□ 0.71
Polr2aP08775 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr2aP08775 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr2aP08775 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
Polr2aP08775 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Polr2aP08775 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Polr2aP08775 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Polr2aP08775 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.45■□□□□ 0.7
Polr2aP08775 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr2aP08775 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.45■□□□□ 0.7
Polr2aP08775 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Polr2aP08775 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.44■□□□□ 0.7
Polr2aP08775 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.44■□□□□ 0.7
Polr2aP08775 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.44■□□□□ 0.7
Polr2aP08775 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.44■□□□□ 0.7
Polr2aP08775 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.44■□□□□ 0.7
Polr2aP08775 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.44■□□□□ 0.7
Polr2aP08775 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.44■□□□□ 0.7
Polr2aP08775 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Polr2aP08775 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Polr2aP08775 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr2aP08775 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Polr2aP08775 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.43■□□□□ 0.7
Polr2aP08775 Gm2756-201ENSMUST00000195851 400 ntBASIC19.43■□□□□ 0.7
Polr2aP08775 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.43■□□□□ 0.7
Polr2aP08775 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Polr2aP08775 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Gm7063-201ENSMUST00000186840 981 ntBASIC19.43■□□□□ 0.7
Polr2aP08775 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.43■□□□□ 0.7
Polr2aP08775 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr2aP08775 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Polr2aP08775 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.42■□□□□ 0.7
Polr2aP08775 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr2aP08775 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Polr2aP08775 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr2aP08775 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr2aP08775 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Gm25911-201ENSMUST00000157621 56 ntBASIC19.41■□□□□ 0.7
Polr2aP08775 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.41■□□□□ 0.7
Polr2aP08775 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Gm2213-201ENSMUST00000197485 688 ntBASIC19.41■□□□□ 0.7
Polr2aP08775 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.41■□□□□ 0.7
Polr2aP08775 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.41■□□□□ 0.7
Polr2aP08775 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Polr2aP08775 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Polr2aP08775 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Gm25990-201ENSMUST00000102440 86 ntBASIC19.41■□□□□ 0.7
Polr2aP08775 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.41■□□□□ 0.7
Polr2aP08775 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Polr2aP08775 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms