Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
P06320 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
P06320 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC10.83□□□□□ -0.68
P06320 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
P06320 Gm8493-201ENSMUST00000196881 489 ntBASIC10.83□□□□□ -0.68
P06320 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC10.83□□□□□ -0.68
P06320 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P06320 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Gm44544-201ENSMUST00000207052 1844 ntBASIC10.83□□□□□ -0.68
P06320 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
P06320 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
P06320 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P06320 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC10.83□□□□□ -0.68
P06320 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P06320 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC10.83□□□□□ -0.68
P06320 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC10.82□□□□□ -0.68
P06320 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P06320 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC10.82□□□□□ -0.68
P06320 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC10.82□□□□□ -0.68
P06320 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC10.82□□□□□ -0.68
P06320 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Gm14281-201ENSMUST00000121700 1294 ntBASIC10.82□□□□□ -0.68
P06320 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC10.82□□□□□ -0.68
P06320 Gm43173-201ENSMUST00000202246 593 ntBASIC10.82□□□□□ -0.68
P06320 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC10.82□□□□□ -0.68
P06320 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC10.82□□□□□ -0.68
P06320 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
P06320 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P06320 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Gm16401-202ENSMUST00000197463 2074 ntBASIC10.81□□□□□ -0.68
P06320 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
P06320 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
P06320 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
P06320 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Gm22325-201ENSMUST00000158904 308 ntBASIC10.81□□□□□ -0.68
P06320 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC10.81□□□□□ -0.68
P06320 Gm40848-201ENSMUST00000221998 324 ntBASIC10.81□□□□□ -0.68
P06320 AC140930.3-201ENSMUST00000222935 274 ntBASIC10.81□□□□□ -0.68
P06320 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
P06320 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
P06320 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
P06320 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC10.81□□□□□ -0.68
P06320 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
P06320 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P06320 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P06320 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms