Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.51□□□□□ -0.41
TcraP01849 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.51□□□□□ -0.41
TcraP01849 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.51□□□□□ -0.41
TcraP01849 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.51□□□□□ -0.41
TcraP01849 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TcraP01849 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TcraP01849 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.51□□□□□ -0.41
TcraP01849 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TcraP01849 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TcraP01849 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.51□□□□□ -0.41
TcraP01849 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TcraP01849 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.5□□□□□ -0.41
TcraP01849 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.5□□□□□ -0.41
TcraP01849 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.5□□□□□ -0.41
TcraP01849 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TcraP01849 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TcraP01849 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Gm9988-201ENSMUST00000069786 435 ntBASIC12.49□□□□□ -0.41
TcraP01849 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TcraP01849 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TcraP01849 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TcraP01849 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TcraP01849 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TcraP01849 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.48□□□□□ -0.41
TcraP01849 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
TcraP01849 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TcraP01849 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TcraP01849 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TcraP01849 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TcraP01849 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
TcraP01849 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TcraP01849 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.48□□□□□ -0.41
TcraP01849 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.48□□□□□ -0.41
TcraP01849 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms