Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.56■□□□□ 0.72
Becn1O88597 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.56■□□□□ 0.72
Becn1O88597 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.56■□□□□ 0.72
Becn1O88597 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.56■□□□□ 0.72
Becn1O88597 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Becn1O88597 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Becn1O88597 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.56■□□□□ 0.72
Becn1O88597 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Becn1O88597 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.56■□□□□ 0.72
Becn1O88597 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Becn1O88597 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
Becn1O88597 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Becn1O88597 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.55■□□□□ 0.72
Becn1O88597 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.55■□□□□ 0.72
Becn1O88597 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Becn1O88597 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Becn1O88597 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Becn1O88597 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Becn1O88597 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Gm13534-201ENSMUST00000121169 513 ntBASIC19.54■□□□□ 0.72
Becn1O88597 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.54■□□□□ 0.72
Becn1O88597 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Becn1O88597 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Becn1O88597 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.53■□□□□ 0.72
Becn1O88597 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.53■□□□□ 0.72
Becn1O88597 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Becn1O88597 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
Becn1O88597 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Becn1O88597 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Becn1O88597 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Becn1O88597 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Becn1O88597 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Becn1O88597 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Becn1O88597 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Becn1O88597 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Becn1O88597 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.52■□□□□ 0.72
Becn1O88597 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Becn1O88597 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Becn1O88597 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Becn1O88597 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Becn1O88597 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Becn1O88597 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Becn1O88597 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Becn1O88597 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Becn1O88597 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Becn1O88597 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Becn1O88597 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Becn1O88597 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Becn1O88597 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Becn1O88597 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Becn1O88597 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Becn1O88597 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms