Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3aO88508 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.13■□□□□ 0.33
Dnmt3aO88508 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3aO88508 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3aO88508 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dnmt3aO88508 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dnmt3aO88508 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Gm15565-201ENSMUST00000118890 427 ntBASIC17.11■□□□□ 0.33
Dnmt3aO88508 Gm7638-201ENSMUST00000121348 967 ntBASIC17.11■□□□□ 0.33
Dnmt3aO88508 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Gm37025-201ENSMUST00000195159 829 ntBASIC17.11■□□□□ 0.33
Dnmt3aO88508 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dnmt3aO88508 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Dnmt3aO88508 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Gm27463-201ENSMUST00000183569 57 ntBASIC17.09■□□□□ 0.33
Dnmt3aO88508 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.09■□□□□ 0.33
Dnmt3aO88508 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Dnmt3aO88508 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.08■□□□□ 0.33
Dnmt3aO88508 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Dnmt3aO88508 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnmt3aO88508 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnmt3aO88508 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Dnmt3aO88508 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms