Protein–RNA interactions for Protein: O35646

Capn6, Calpain-6, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6O35646 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.4■□□□□ 0.38
Capn6O35646 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn6O35646 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn6O35646 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Capn6O35646 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Capn6O35646 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Capn6O35646 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Capn6O35646 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.39■□□□□ 0.37
Capn6O35646 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Capn6O35646 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Capn6O35646 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Capn6O35646 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Capn6O35646 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Capn6O35646 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.38■□□□□ 0.37
Capn6O35646 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Capn6O35646 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Capn6O35646 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.38■□□□□ 0.37
Capn6O35646 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Capn6O35646 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Capn6O35646 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Capn6O35646 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.37■□□□□ 0.37
Capn6O35646 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.37■□□□□ 0.37
Capn6O35646 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Capn6O35646 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.37■□□□□ 0.37
Capn6O35646 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Capn6O35646 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Capn6O35646 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Capn6O35646 Gm37292-201ENSMUST00000192062 758 ntBASIC17.36■□□□□ 0.37
Capn6O35646 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Capn6O35646 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Capn6O35646 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Capn6O35646 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.35■□□□□ 0.37
Capn6O35646 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
Capn6O35646 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.35■□□□□ 0.37
Capn6O35646 Gm4974-201ENSMUST00000209974 875 ntBASIC17.35■□□□□ 0.37
Capn6O35646 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Capn6O35646 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Capn6O35646 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.34■□□□□ 0.37
Capn6O35646 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Capn6O35646 Gm12382-201ENSMUST00000122005 922 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms