Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk3O35492 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.24■□□□□ 0.19
Clk3O35492 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.24■□□□□ 0.19
Clk3O35492 Gm10653-202ENSMUST00000139570 835 ntBASIC16.24■□□□□ 0.19
Clk3O35492 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.24■□□□□ 0.19
Clk3O35492 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clk3O35492 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.23■□□□□ 0.19
Clk3O35492 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Clk3O35492 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.23■□□□□ 0.19
Clk3O35492 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.23■□□□□ 0.19
Clk3O35492 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Clk3O35492 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clk3O35492 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Clk3O35492 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Clk3O35492 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.22■□□□□ 0.19
Clk3O35492 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.22■□□□□ 0.19
Clk3O35492 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.22■□□□□ 0.19
Clk3O35492 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.22■□□□□ 0.19
Clk3O35492 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.22■□□□□ 0.19
Clk3O35492 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clk3O35492 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk3O35492 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.21■□□□□ 0.19
Clk3O35492 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Clk3O35492 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk3O35492 Gm13168-201ENSMUST00000121771 632 ntBASIC16.21■□□□□ 0.19
Clk3O35492 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk3O35492 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Clk3O35492 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk3O35492 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.21■□□□□ 0.19
Clk3O35492 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clk3O35492 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.21■□□□□ 0.18
Clk3O35492 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clk3O35492 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Clk3O35492 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clk3O35492 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clk3O35492 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Clk3O35492 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clk3O35492 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clk3O35492 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clk3O35492 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clk3O35492 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clk3O35492 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Gm15378-201ENSMUST00000121894 207 ntBASIC16.2■□□□□ 0.18
Clk3O35492 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.2■□□□□ 0.18
Clk3O35492 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.2■□□□□ 0.18
Clk3O35492 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clk3O35492 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.2■□□□□ 0.18
Clk3O35492 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clk3O35492 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clk3O35492 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms