Protein–RNA interactions for Protein: J3QMM8

Gm7971, Predicted gene 16429, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm7971J3QMM8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.6■□□□□ 0.25
Gm7971J3QMM8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Gm27405-201ENSMUST00000184201 112 ntBASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm7971J3QMM8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm7971J3QMM8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Gm7971J3QMM8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm7971J3QMM8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Gm7971J3QMM8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Gm13216-201ENSMUST00000117145 591 ntBASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Gm6576-201ENSMUST00000169678 883 ntBASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Gm8495-201ENSMUST00000188740 694 ntBASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Gm5408-201ENSMUST00000197998 747 ntBASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Gm2559-201ENSMUST00000201323 363 ntBASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm7971J3QMM8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Gm15375-201ENSMUST00000119510 849 ntBASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm7971J3QMM8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Gm7971J3QMM8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms