Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Gm37179-201ENSMUST00000194862 823 ntBASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh1F7BJK1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh1F7BJK1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh1F7BJK1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Gm6576-201ENSMUST00000169678 883 ntBASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Gm10138-203ENSMUST00000206952 366 ntBASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh1F7BJK1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh1F7BJK1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh1F7BJK1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh1F7BJK1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms