Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.34□□□□□ -0.11
Col6a4A2AX52 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.34□□□□□ -0.11
Col6a4A2AX52 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a4A2AX52 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.33□□□□□ -0.11
Col6a4A2AX52 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.33□□□□□ -0.11
Col6a4A2AX52 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a4A2AX52 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.33□□□□□ -0.11
Col6a4A2AX52 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a4A2AX52 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a4A2AX52 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a4A2AX52 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Gm12895-201ENSMUST00000122214 226 ntBASIC14.33□□□□□ -0.12
Col6a4A2AX52 Mir5126-201ENSMUST00000175513 77 ntBASIC14.33□□□□□ -0.12
Col6a4A2AX52 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.33□□□□□ -0.12
Col6a4A2AX52 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col6a4A2AX52 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a4A2AX52 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.32□□□□□ -0.12
Col6a4A2AX52 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a4A2AX52 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.32□□□□□ -0.12
Col6a4A2AX52 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a4A2AX52 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.32□□□□□ -0.12
Col6a4A2AX52 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a4A2AX52 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 BC021767-201ENSMUST00000126387 1716 ntBASIC14.31□□□□□ -0.12
Col6a4A2AX52 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Col6a4A2AX52 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.31□□□□□ -0.12
Col6a4A2AX52 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a4A2AX52 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms