Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43183-201ENSMUST00000200632 547 ntBASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms