Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav19A0A0B4J1K4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gm7290-201ENSMUST00000104990 617 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gm12918-201ENSMUST00000120234 636 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gm15710-201ENSMUST00000121821 636 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Mir2861-201ENSMUST00000175539 82 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gm5075-201ENSMUST00000196916 622 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gm42642-201ENSMUST00000200683 355 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Gm44549-201ENSMUST00000208351 577 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav19A0A0B4J1K4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav19A0A0B4J1K4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav19A0A0B4J1K4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav19A0A0B4J1K4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav19A0A0B4J1K4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav19A0A0B4J1K4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Trav19A0A0B4J1K4 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav19A0A0B4J1K4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Gm13401-201ENSMUST00000117074 291 ntBASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 AV356131-201ENSMUST00000206201 750 ntBASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav19A0A0B4J1K4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Gm6211-202ENSMUST00000167849 925 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms