Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav4-3A0A0B4J1K1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav4-3A0A0B4J1K1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm9959-201ENSMUST00000068277 390 ntBASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4-3A0A0B4J1K1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trav4-3A0A0B4J1K1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms