Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav11A0A0B4J1J9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav11A0A0B4J1J9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav11A0A0B4J1J9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav11A0A0B4J1J9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav11A0A0B4J1J9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav11A0A0B4J1J9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav11A0A0B4J1J9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Trav11A0A0B4J1J9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav11A0A0B4J1J9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Gm7514-201ENSMUST00000209475 934 ntBASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav11A0A0B4J1J9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav11A0A0B4J1J9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Mir8112-201ENSMUST00000184382 131 ntBASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav11A0A0B4J1J9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav11A0A0B4J1J9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms