Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ighv1-47A0A0A6YY41 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Gm6576-201ENSMUST00000169678 883 ntBASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv1-47A0A0A6YY41 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.08□□□□□ -0.15
Ighv1-47A0A0A6YY41 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ighv1-47A0A0A6YY41 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ighv1-47A0A0A6YY41 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ighv1-47A0A0A6YY41 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ighv1-47A0A0A6YY41 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm42545-201ENSMUST00000202755 922 ntBASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv1-47A0A0A6YY41 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm5643-201ENSMUST00000117081 966 ntBASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv1-47A0A0A6YY41 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ighv1-47A0A0A6YY41 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms