Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4n-4A0A075B615 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4n-4A0A075B615 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav4n-4A0A075B615 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms