Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 CST12P-201ENST00000457644 362 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC007998.1-201ENST00000474156 672 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 RN7SL714P-201ENST00000487050 298 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 SNORA26.10-201ENST00000516427 141 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AL359704.2-201ENST00000604335 521 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 AL512652.1-201ENST00000619006 500 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC127024.6-201ENST00000621598 424 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 SPATA31C1-201ENST00000420021 3895 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 HCFC2P1-201ENST00000392864 1592 ntBASIC7.92□□□□□ -1.14
SYNE4Q8N205 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SYNE4Q8N205 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE4Q8N205 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE4Q8N205 AC092111.1-201ENST00000618256 3358 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC074141.1-201ENST00000588129 2995 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AL139415.1-201ENST00000424862 352 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 HIGD1AP16-201ENST00000450986 258 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 RN7SL284P-201ENST00000498823 275 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 RNA5SP271-201ENST00000516700 88 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC068305.2-201ENST00000550567 1205 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC009712.1-201ENST00000564938 316 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 SNORA74.4-201ENST00000607595 199 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 AL008723.3-201ENST00000608926 449 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE4Q8N205 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC062022.1-201ENST00000451026 1684 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 AC083806.2-201ENST00000617795 2685 ntBASIC7.91□□□□□ -1.14
SYNE4Q8N205 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE4Q8N205 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE4Q8N205 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE4Q8N205 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE4Q8N205 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE4Q8N205 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE4Q8N205 AC125238.2-201ENST00000430003 1440 ntBASIC7.9□□□□□ -1.14
SYNE4Q8N205 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE4Q8N205 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE4Q8N205 TMSB4XP4-201ENST00000323496 618 ntBASIC7.9□□□□□ -1.14
SYNE4Q8N205 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.9□□□□□ -1.14
SYNE4Q8N205 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 OR5H7P-201ENST00000514084 930 ntBASIC7.9□□□□□ -1.14
SYNE4Q8N205 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 NATP-201ENST00000523491 878 ntBASIC7.9□□□□□ -1.14
SYNE4Q8N205 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 OR7A11P-201ENST00000597719 953 ntBASIC7.9□□□□□ -1.14
SYNE4Q8N205 AC013244.1-201ENST00000604279 193 ntBASIC7.9□□□□□ -1.14
SYNE4Q8N205 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.9□□□□□ -1.14
SYNE4Q8N205 AC079776.5-201ENST00000641920 211 ntBASIC7.9□□□□□ -1.14
SYNE4Q8N205 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms