Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 HSPD1P7-201ENST00000447985 1686 ntBASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 AP000547.3-204ENST00000588548 2523 ntBASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC144NLQ6NUI1 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC079298.1-201ENST00000625026 1619 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 DDX43P1-201ENST00000510713 1763 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 C1D-202ENST00000407324 1379 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AL358913.2-201ENST00000553881 1548 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RN7SKP28-201ENST00000364770 305 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RNU6-796P-201ENST00000391086 107 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RNU1-56P-201ENST00000391303 164 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RPL22P22-201ENST00000395439 379 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AL359715.1-201ENST00000404330 555 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AL355615.1-201ENST00000406187 641 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AL662791.3-201ENST00000413771 776 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RPS26P13-201ENST00000419030 330 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC009518.3-201ENST00000438972 253 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 DBIL5P2-201ENST00000443827 253 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RPS7P4-201ENST00000444127 582 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 HMGB1P26-201ENST00000452520 628 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RPS3AP53-201ENST00000454716 778 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RPL5P13-201ENST00000462840 709 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RPS14P8-201ENST00000478778 369 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 UBE2V1P12-201ENST00000503954 474 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 RNA5SP318-201ENST00000516352 92 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 BUD31P1-201ENST00000521828 359 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC139697.1-201ENST00000548429 745 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC104229.1-201ENST00000561364 255 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC126323.4-201ENST00000566935 234 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC124283.4-201ENST00000581815 456 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC011193.2-201ENST00000582638 367 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC006116.5-201ENST00000591936 559 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC011492.1-201ENST00000600023 315 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC007255.2-201ENST00000604053 631 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC111186.1-201ENST00000604684 130 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC023206.1-201ENST00000605824 298 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC124016.2-201ENST00000610058 665 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC026951.2-201ENST00000613847 241 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC140479.4-205ENST00000636339 820 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 BX284613.1-201ENST00000452221 1641 ntBASIC5.7□□□□□ -1.5
CCDC144NLQ6NUI1 KARSP1-201ENST00000451871 1752 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms