Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NKX6-1P78426 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NKX6-1P78426 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.27□□□□□ -1.41
NKX6-1P78426 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NKX6-1P78426 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NKX6-1P78426 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NKX6-1P78426 AL133243.4-201ENST00000623116 3109 ntBASIC6.27□□□□□ -1.41
NKX6-1P78426 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.27□□□□□ -1.41
NKX6-1P78426 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
NKX6-1P78426 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NKX6-1P78426 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NKX6-1P78426 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 RN7SKP148-201ENST00000410179 275 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC241520.1-201ENST00000422654 1099 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AL034379.1-201ENST00000423216 253 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 MTCO1P43-201ENST00000431831 488 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.26□□□□□ -1.41
NKX6-1P78426 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC104698.1-201ENST00000435671 276 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC114928.1-201ENST00000446516 415 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 MGAT2P1-201ENST00000449718 797 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 RPL31P11-202ENST00000454082 372 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC104164.3-201ENST00000467363 1258 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 CYCSP20-201ENST00000473154 315 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.26□□□□□ -1.41
NKX6-1P78426 RN7SL502P-201ENST00000481857 290 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AL117692.1-201ENST00000494283 713 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC105420.1-201ENST00000504389 582 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC098862.1-201ENST00000504991 413 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC139713.1-202ENST00000512366 460 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 MTND2P32-201ENST00000521584 1038 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.26□□□□□ -1.41
NKX6-1P78426 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.26□□□□□ -1.41
NKX6-1P78426 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 NDUFA3P4-201ENST00000560814 250 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AGGF1P9-201ENST00000561884 913 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 MIR4509-3-201ENST00000578671 94 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.26□□□□□ -1.41
NKX6-1P78426 MIR4509-2-201ENST00000583920 94 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC011492.1-201ENST00000600023 315 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 CR382285.1-202ENST00000604687 547 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.26□□□□□ -1.41
NKX6-1P78426 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC027271.1-201ENST00000610270 610 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 MIR4509-1-201ENST00000618224 94 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC012629.3-201ENST00000623397 328 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC092159.4-201ENST00000624944 550 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AL109659.3-201ENST00000624985 950 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NKX6-1P78426 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 CDY5P-201ENST00000411487 1580 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 CDY9P-201ENST00000451397 1580 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC007114.2-201ENST00000576014 4281 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 DDX43P1-201ENST00000510713 1763 ntBASIC6.26□□□□□ -1.41
NKX6-1P78426 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NKX6-1P78426 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NKX6-1P78426 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.26□□□□□ -1.41
NKX6-1P78426 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.25□□□□□ -1.41
NKX6-1P78426 AC008432.1-201ENST00000615912 1320 ntBASIC6.25□□□□□ -1.41
NKX6-1P78426 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NKX6-1P78426 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
NKX6-1P78426 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.25□□□□□ -1.41
NKX6-1P78426 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NKX6-1P78426 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NKX6-1P78426 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.25□□□□□ -1.41
NKX6-1P78426 AC079298.1-201ENST00000625026 1619 ntBASIC6.25□□□□□ -1.41
NKX6-1P78426 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NKX6-1P78426 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NKX6-1P78426 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms