Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM4P67936 RPL21P42-201ENST00000488408 464 ntBASIC7.02□□□□□ -1.29
TPM4P67936 AL035690.1-201ENST00000490892 383 ntBASIC7.02□□□□□ -1.29
TPM4P67936 CYP4F27P-201ENST00000514557 494 ntBASIC7.02□□□□□ -1.29
TPM4P67936 AC093878.1-201ENST00000515630 432 ntBASIC7.02□□□□□ -1.29
TPM4P67936 RN7SKP242-201ENST00000515967 289 ntBASIC7.02□□□□□ -1.29
TPM4P67936 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 HNRNPCP8-201ENST00000528764 888 ntBASIC7.02□□□□□ -1.29
TPM4P67936 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
TPM4P67936 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 MIR4685-201ENST00000578185 69 ntBASIC7.02□□□□□ -1.29
TPM4P67936 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.02□□□□□ -1.29
TPM4P67936 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.02□□□□□ -1.29
TPM4P67936 AC027334.1-201ENST00000603257 310 ntBASIC7.02□□□□□ -1.29
TPM4P67936 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 AC006924.1-201ENST00000610750 559 ntBASIC7.02□□□□□ -1.29
TPM4P67936 AC026333.4-201ENST00000613543 544 ntBASIC7.02□□□□□ -1.29
TPM4P67936 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TPM4P67936 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.02□□□□□ -1.29
TPM4P67936 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TPM4P67936 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM4P67936 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 LINC01808-203ENST00000641932 1643 ntBASIC7.01□□□□□ -1.29
TPM4P67936 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
TPM4P67936 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
TPM4P67936 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.01□□□□□ -1.29
TPM4P67936 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM4P67936 MRPS6P2-201ENST00000381143 370 ntBASIC7.01□□□□□ -1.29
TPM4P67936 AL590635.1-201ENST00000406314 586 ntBASIC7.01□□□□□ -1.29
TPM4P67936 SOD1P1-201ENST00000407803 440 ntBASIC7.01□□□□□ -1.29
TPM4P67936 RNU2-5P-201ENST00000410533 180 ntBASIC7.01□□□□□ -1.29
TPM4P67936 AC015977.1-201ENST00000418887 292 ntBASIC7.01□□□□□ -1.29
TPM4P67936 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 AL365220.1-201ENST00000432923 399 ntBASIC7.01□□□□□ -1.29
TPM4P67936 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.01□□□□□ -1.29
TPM4P67936 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM4P67936 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM4P67936 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM4P67936 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.01□□□□□ -1.29
TPM4P67936 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM4P67936 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM4P67936 AC024451.4-201ENST00000602578 752 ntBASIC7.01□□□□□ -1.29
TPM4P67936 AC093388.1-201ENST00000609166 430 ntBASIC7.01□□□□□ -1.29
TPM4P67936 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.01□□□□□ -1.29
TPM4P67936 MIR6762-201ENST00000613340 86 ntBASIC7.01□□□□□ -1.29
TPM4P67936 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC7.01□□□□□ -1.29
TPM4P67936 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TPM4P67936 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM4P67936 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.01□□□□□ -1.29
TPM4P67936 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
TPM4P67936 AC022164.1-201ENST00000568767 2673 ntBASIC7.01□□□□□ -1.29
TPM4P67936 AC092070.2-203ENST00000598377 3644 ntBASIC7.01□□□□□ -1.29
TPM4P67936 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.01□□□□□ -1.29
TPM4P67936 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TPM4P67936 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
TPM4P67936 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7□□□□□ -1.29
TPM4P67936 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 SNORA11D-201ENST00000408548 128 ntBASIC7□□□□□ -1.29
TPM4P67936 SNORA11E-201ENST00000408778 128 ntBASIC7□□□□□ -1.29
TPM4P67936 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 AHCYP8-201ENST00000425108 209 ntBASIC7□□□□□ -1.29
TPM4P67936 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7□□□□□ -1.29
TPM4P67936 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7□□□□□ -1.29
TPM4P67936 RPS4XP19-201ENST00000460237 736 ntBASIC7□□□□□ -1.29
TPM4P67936 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7□□□□□ -1.29
TPM4P67936 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7□□□□□ -1.29
TPM4P67936 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7□□□□□ -1.29
TPM4P67936 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7□□□□□ -1.29
TPM4P67936 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC7□□□□□ -1.29
TPM4P67936 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7□□□□□ -1.29
TPM4P67936 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7□□□□□ -1.29
TPM4P67936 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7□□□□□ -1.29
TPM4P67936 RPA2P3-201ENST00000533268 770 ntBASIC7□□□□□ -1.29
TPM4P67936 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7□□□□□ -1.29
TPM4P67936 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7□□□□□ -1.29
TPM4P67936 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7□□□□□ -1.29
TPM4P67936 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7□□□□□ -1.29
TPM4P67936 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7□□□□□ -1.29
TPM4P67936 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms