Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CDX1P47902 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.43□□□□□ -1.54
CDX1P47902 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.43□□□□□ -1.54
CDX1P47902 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.43□□□□□ -1.54
CDX1P47902 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.43□□□□□ -1.54
CDX1P47902 AL109628.1-201ENST00000556877 366 ntBASIC5.43□□□□□ -1.54
CDX1P47902 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 AC023827.2-201ENST00000566880 1061 ntBASIC5.43□□□□□ -1.54
CDX1P47902 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.43□□□□□ -1.54
CDX1P47902 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.43□□□□□ -1.54
CDX1P47902 MIR4428-201ENST00000584884 73 ntBASIC5.43□□□□□ -1.54
CDX1P47902 AC007255.2-201ENST00000604053 631 ntBASIC5.43□□□□□ -1.54
CDX1P47902 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.43□□□□□ -1.54
CDX1P47902 AL353729.2-201ENST00000605859 1249 ntBASIC5.43□□□□□ -1.54
CDX1P47902 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.43□□□□□ -1.54
CDX1P47902 AL137246.2-201ENST00000613439 662 ntBASIC5.43□□□□□ -1.54
CDX1P47902 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 AC131009.3-201ENST00000621809 287 ntBASIC5.43□□□□□ -1.54
CDX1P47902 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CDX1P47902 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC5.43□□□□□ -1.54
CDX1P47902 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 AC102941.1-201ENST00000567616 1537 ntBASIC5.43□□□□□ -1.54
CDX1P47902 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDX1P47902 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 C1D-202ENST00000407324 1379 ntTSL 3 BASIC5.42□□□□□ -1.54
CDX1P47902 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CDX1P47902 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CDX1P47902 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CDX1P47902 DDX18P6-201ENST00000450119 1997 ntBASIC5.42□□□□□ -1.54
CDX1P47902 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 CDY19P-201ENST00000411668 1613 ntBASIC5.42□□□□□ -1.54
CDX1P47902 CDY18P-201ENST00000438294 1609 ntBASIC5.42□□□□□ -1.54
CDX1P47902 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 AC025470.1-201ENST00000510053 2032 ntBASIC5.42□□□□□ -1.54
CDX1P47902 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDX1P47902 OR56A4-201ENST00000330728 1209 ntBASIC5.42□□□□□ -1.54
CDX1P47902 OR10D1P-201ENST00000355343 936 ntBASIC5.42□□□□□ -1.54
CDX1P47902 RNA5SP172-201ENST00000365061 118 ntBASIC5.42□□□□□ -1.54
CDX1P47902 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 RN7SKP62-201ENST00000384539 329 ntBASIC5.42□□□□□ -1.54
CDX1P47902 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 AC007568.1-201ENST00000422912 471 ntBASIC5.42□□□□□ -1.54
CDX1P47902 AL034379.1-201ENST00000423216 253 ntBASIC5.42□□□□□ -1.54
CDX1P47902 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.42□□□□□ -1.54
CDX1P47902 RPL3P11-201ENST00000434028 1146 ntBASIC5.42□□□□□ -1.54
CDX1P47902 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 AL096803.1-201ENST00000456921 1021 ntBASIC5.42□□□□□ -1.54
CDX1P47902 AC108751.3-201ENST00000461814 1020 ntBASIC5.42□□□□□ -1.54
CDX1P47902 RPS4XP17-201ENST00000479057 754 ntBASIC5.42□□□□□ -1.54
CDX1P47902 RPL23AP8-201ENST00000479812 475 ntBASIC5.42□□□□□ -1.54
CDX1P47902 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 AC008868.1-201ENST00000509786 737 ntBASIC5.42□□□□□ -1.54
CDX1P47902 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.42□□□□□ -1.54
CDX1P47902 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC5.42□□□□□ -1.54
CDX1P47902 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.42□□□□□ -1.54
CDX1P47902 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.42□□□□□ -1.54
CDX1P47902 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.42□□□□□ -1.54
CDX1P47902 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.42□□□□□ -1.54
CDX1P47902 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 AC010287.1-201ENST00000566916 357 ntBASIC5.42□□□□□ -1.54
CDX1P47902 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.42□□□□□ -1.54
CDX1P47902 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.42□□□□□ -1.54
CDX1P47902 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.42□□□□□ -1.54
CDX1P47902 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.42□□□□□ -1.54
CDX1P47902 RN7SL32P-201ENST00000580514 281 ntBASIC5.42□□□□□ -1.54
CDX1P47902 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC5.42□□□□□ -1.54
CDX1P47902 AC135068.11-201ENST00000636378 921 ntBASIC5.42□□□□□ -1.54
CDX1P47902 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDX1P47902 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CDX1P47902 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 NEK2P4-201ENST00000425793 1329 ntBASIC5.42□□□□□ -1.54
CDX1P47902 AL512310.3-201ENST00000547023 1335 ntBASIC5.42□□□□□ -1.54
CDX1P47902 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDX1P47902 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.42□□□□□ -1.54
CDX1P47902 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDX1P47902 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms