Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
MTHFRP42898 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.86□□□□□ -1.31
MTHFRP42898 MAPK10-287ENST00000641217 3037 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 MIR199B-201ENST00000384849 110 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 RPL9P21-201ENST00000392269 505 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 AL451046.1-201ENST00000406097 534 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.86□□□□□ -1.31
MTHFRP42898 AC104843.2-201ENST00000427666 297 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.86□□□□□ -1.31
MTHFRP42898 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.86□□□□□ -1.31
MTHFRP42898 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.86□□□□□ -1.31
MTHFRP42898 FABP5P2-201ENST00000439042 408 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 AL136455.1-201ENST00000441083 1240 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 AL645936.1-201ENST00000441979 518 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.86□□□□□ -1.31
MTHFRP42898 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.86□□□□□ -1.31
MTHFRP42898 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.86□□□□□ -1.31
MTHFRP42898 AC131392.1-201ENST00000506490 633 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 AC106872.4-201ENST00000510050 523 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.86□□□□□ -1.31
MTHFRP42898 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.86□□□□□ -1.31
MTHFRP42898 AC122713.1-201ENST00000518368 1015 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 TRIM77BP-201ENST00000524985 1119 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 CYCSP38-201ENST00000559840 322 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 ULK4P1-202ENST00000565174 503 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 MIR3614-201ENST00000581261 86 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.86□□□□□ -1.31
MTHFRP42898 MIR6085-201ENST00000618314 110 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.86□□□□□ -1.31
MTHFRP42898 AC073488.9-201ENST00000631601 754 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.86□□□□□ -1.31
MTHFRP42898 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.86□□□□□ -1.31
MTHFRP42898 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
MTHFRP42898 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
MTHFRP42898 AL137058.3-201ENST00000624531 3099 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 HSPD1P9-201ENST00000420325 1636 ntBASIC6.86□□□□□ -1.31
MTHFRP42898 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MTHFRP42898 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 AC093225.1-201ENST00000506867 1408 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.85□□□□□ -1.31
MTHFRP42898 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 AC022613.3-201ENST00000560740 1346 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
MTHFRP42898 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
MTHFRP42898 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 RPL12P13-201ENST00000310055 497 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
MTHFRP42898 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 CXCR2P1-202ENST00000443392 1074 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.85□□□□□ -1.31
MTHFRP42898 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 RPL5P11-201ENST00000498068 893 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 AC095057.1-201ENST00000507583 168 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 AC027369.2-201ENST00000528030 440 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.85□□□□□ -1.31
MTHFRP42898 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.85□□□□□ -1.31
MTHFRP42898 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.85□□□□□ -1.31
MTHFRP42898 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 AC008507.3-201ENST00000585753 472 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 AL049840.5-201ENST00000602827 552 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 AC073389.3-201ENST00000609434 935 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.85□□□□□ -1.31
MTHFRP42898 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.85□□□□□ -1.31
MTHFRP42898 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 NCOA4P2-201ENST00000340589 1813 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 AC120036.2-201ENST00000509729 1474 ntBASIC6.85□□□□□ -1.31
MTHFRP42898 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MTHFRP42898 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms