Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 OR7E91P-202ENST00000642062 1198 ntBASIC7.22□□□□□ -1.25
CIITAP33076 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 TNPO1P2-201ENST00000426249 2665 ntBASIC7.22□□□□□ -1.25
CIITAP33076 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CIITAP33076 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CIITAP33076 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.22□□□□□ -1.25
CIITAP33076 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CIITAP33076 BRD7P6-201ENST00000431406 1860 ntBASIC7.21□□□□□ -1.25
CIITAP33076 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.21□□□□□ -1.25
CIITAP33076 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CIITAP33076 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CIITAP33076 CDY5P-201ENST00000411487 1580 ntBASIC7.21□□□□□ -1.25
CIITAP33076 CDY9P-201ENST00000451397 1580 ntBASIC7.21□□□□□ -1.25
CIITAP33076 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CIITAP33076 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.21□□□□□ -1.25
CIITAP33076 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.21□□□□□ -1.25
CIITAP33076 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CIITAP33076 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 TMCC1P1-201ENST00000518897 1980 ntBASIC7.21□□□□□ -1.26
CIITAP33076 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.21□□□□□ -1.26
CIITAP33076 RN7SKP86-201ENST00000410454 332 ntBASIC7.21□□□□□ -1.26
CIITAP33076 MTND2P12-201ENST00000417560 1252 ntBASIC7.21□□□□□ -1.26
CIITAP33076 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.21□□□□□ -1.26
CIITAP33076 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.21□□□□□ -1.26
CIITAP33076 AC094019.1-201ENST00000434678 472 ntBASIC7.21□□□□□ -1.26
CIITAP33076 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.21□□□□□ -1.26
CIITAP33076 POU5F1P5-201ENST00000445059 658 ntBASIC7.21□□□□□ -1.26
CIITAP33076 SNX18P26-201ENST00000458433 740 ntBASIC7.21□□□□□ -1.26
CIITAP33076 RNU6-775P-201ENST00000459318 96 ntBASIC7.21□□□□□ -1.26
CIITAP33076 RN7SL369P-201ENST00000477138 299 ntBASIC7.21□□□□□ -1.26
CIITAP33076 RPS27P20-201ENST00000492051 246 ntBASIC7.21□□□□□ -1.26
CIITAP33076 RN7SL104P-201ENST00000498686 293 ntBASIC7.21□□□□□ -1.26
CIITAP33076 RNU6-751P-201ENST00000516382 101 ntBASIC7.21□□□□□ -1.26
CIITAP33076 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC7.21□□□□□ -1.26
CIITAP33076 KCTD9P4-201ENST00000526766 1166 ntBASIC7.21□□□□□ -1.26
CIITAP33076 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.21□□□□□ -1.26
CIITAP33076 DPPA3P2-201ENST00000553589 478 ntBASIC7.21□□□□□ -1.26
CIITAP33076 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.21□□□□□ -1.26
CIITAP33076 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.21□□□□□ -1.26
CIITAP33076 AC005828.7-201ENST00000607331 556 ntBASIC7.21□□□□□ -1.26
CIITAP33076 AP003400.6-201ENST00000624698 740 ntBASIC7.21□□□□□ -1.26
CIITAP33076 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.21□□□□□ -1.26
CIITAP33076 OR8A1-204ENST00000642111 1145 ntBASIC7.21□□□□□ -1.26
CIITAP33076 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
CIITAP33076 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 MAPK10-287ENST00000641217 3037 ntBASIC7.21□□□□□ -1.26
CIITAP33076 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
CIITAP33076 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.21□□□□□ -1.26
CIITAP33076 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CIITAP33076 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.2□□□□□ -1.26
CIITAP33076 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CIITAP33076 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
CIITAP33076 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.2□□□□□ -1.26
CIITAP33076 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.2□□□□□ -1.26
CIITAP33076 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CIITAP33076 STAG3L4-201ENST00000352103 530 ntBASIC7.2□□□□□ -1.26
CIITAP33076 RNA5SP333-201ENST00000363466 118 ntBASIC7.2□□□□□ -1.26
CIITAP33076 RNA5SP334-201ENST00000364825 118 ntBASIC7.2□□□□□ -1.26
CIITAP33076 MIR188-201ENST00000385034 86 ntBASIC7.2□□□□□ -1.26
CIITAP33076 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.2□□□□□ -1.26
CIITAP33076 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.2□□□□□ -1.26
CIITAP33076 AC112492.2-201ENST00000432774 1030 ntBASIC7.2□□□□□ -1.26
CIITAP33076 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.2□□□□□ -1.26
CIITAP33076 SOCS5P1-201ENST00000440415 949 ntBASIC7.2□□□□□ -1.26
CIITAP33076 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.2□□□□□ -1.26
CIITAP33076 RN7SL714P-201ENST00000487050 298 ntBASIC7.2□□□□□ -1.26
CIITAP33076 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.2□□□□□ -1.26
CIITAP33076 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CIITAP33076 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.2□□□□□ -1.26
CIITAP33076 OR4D12P-201ENST00000509361 911 ntBASIC7.2□□□□□ -1.26
CIITAP33076 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.2□□□□□ -1.26
CIITAP33076 AC026616.1-201ENST00000523157 525 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms