Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.09□□□□□ -1.27
TPM3P06753 MIR4433B-201ENST00000581329 102 ntBASIC7.09□□□□□ -1.27
TPM3P06753 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM3P06753 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM3P06753 AC091133.5-201ENST00000603088 301 ntBASIC7.09□□□□□ -1.27
TPM3P06753 AC097641.3-201ENST00000613523 464 ntBASIC7.09□□□□□ -1.27
TPM3P06753 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM3P06753 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM3P06753 OR2A3P-202ENST00000641249 1776 ntBASIC7.09□□□□□ -1.27
TPM3P06753 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM3P06753 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM3P06753 AC022164.1-201ENST00000568767 2673 ntBASIC7.09□□□□□ -1.27
TPM3P06753 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TPM3P06753 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM3P06753 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.09□□□□□ -1.27
TPM3P06753 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
TPM3P06753 AC125238.2-201ENST00000430003 1440 ntBASIC7.09□□□□□ -1.28
TPM3P06753 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
TPM3P06753 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
TPM3P06753 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
TPM3P06753 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
TPM3P06753 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM3P06753 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM3P06753 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TPM3P06753 AC087516.1-201ENST00000561236 2428 ntBASIC7.08□□□□□ -1.28
TPM3P06753 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM3P06753 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TPM3P06753 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TPM3P06753 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TPM3P06753 RNU11-6P-201ENST00000391127 133 ntBASIC7.08□□□□□ -1.28
TPM3P06753 NPM1P31-201ENST00000399021 764 ntBASIC7.08□□□□□ -1.28
TPM3P06753 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM3P06753 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM3P06753 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.08□□□□□ -1.28
TPM3P06753 AC009506.2-201ENST00000420635 840 ntBASIC7.08□□□□□ -1.28
TPM3P06753 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM3P06753 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM3P06753 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.08□□□□□ -1.28
TPM3P06753 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.08□□□□□ -1.28
TPM3P06753 RPS27AP3-201ENST00000453803 454 ntBASIC7.08□□□□□ -1.28
TPM3P06753 Z83838.1-202ENST00000456225 839 ntBASIC7.08□□□□□ -1.28
TPM3P06753 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.08□□□□□ -1.28
TPM3P06753 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.08□□□□□ -1.28
TPM3P06753 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM3P06753 SETP17-201ENST00000534163 817 ntBASIC7.08□□□□□ -1.28
TPM3P06753 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.08□□□□□ -1.28
TPM3P06753 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.08□□□□□ -1.28
TPM3P06753 AC009120.3-201ENST00000563335 499 ntBASIC7.08□□□□□ -1.28
TPM3P06753 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM3P06753 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM3P06753 MIR5682-201ENST00000584864 76 ntBASIC7.08□□□□□ -1.28
TPM3P06753 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.08□□□□□ -1.28
TPM3P06753 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.08□□□□□ -1.28
TPM3P06753 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.08□□□□□ -1.28
TPM3P06753 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM3P06753 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TPM3P06753 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.08□□□□□ -1.28
TPM3P06753 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.08□□□□□ -1.28
TPM3P06753 CAP1P2-201ENST00000417455 1409 ntBASIC7.08□□□□□ -1.28
TPM3P06753 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.08□□□□□ -1.28
TPM3P06753 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
TPM3P06753 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TPM3P06753 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM3P06753 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM3P06753 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM3P06753 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM3P06753 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TPM3P06753 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TPM3P06753 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
TPM3P06753 RN7SKP1-201ENST00000365525 307 ntBASIC7.07□□□□□ -1.28
TPM3P06753 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
TPM3P06753 RPL5P20-201ENST00000403848 896 ntBASIC7.07□□□□□ -1.28
TPM3P06753 MRPS21P5-201ENST00000417885 231 ntBASIC7.07□□□□□ -1.28
TPM3P06753 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TPM3P06753 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC7.07□□□□□ -1.28
TPM3P06753 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TPM3P06753 OSTCP1-201ENST00000455507 450 ntBASIC7.07□□□□□ -1.28
TPM3P06753 AC025271.1-201ENST00000485045 429 ntBASIC7.07□□□□□ -1.28
TPM3P06753 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM3P06753 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM3P06753 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM3P06753 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.07□□□□□ -1.28
TPM3P06753 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.07□□□□□ -1.28
TPM3P06753 AC010442.1-201ENST00000515583 816 ntBASIC7.07□□□□□ -1.28
TPM3P06753 SCARNA5-201ENST00000516201 276 ntBASIC7.07□□□□□ -1.28
TPM3P06753 AC107952.1-201ENST00000524200 376 ntBASIC7.07□□□□□ -1.28
TPM3P06753 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.07□□□□□ -1.28
TPM3P06753 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.07□□□□□ -1.28
TPM3P06753 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.07□□□□□ -1.28
TPM3P06753 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.07□□□□□ -1.28
TPM3P06753 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM3P06753 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM3P06753 EXOSC3P2-201ENST00000594464 497 ntBASIC7.07□□□□□ -1.28
TPM3P06753 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM3P06753 AC027334.1-201ENST00000603257 310 ntBASIC7.07□□□□□ -1.28
TPM3P06753 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.07□□□□□ -1.28
TPM3P06753 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM3P06753 AC007671.1-201ENST00000616957 830 ntBASIC7.07□□□□□ -1.28
TPM3P06753 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
TPM3P06753 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms