Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LMO4P61968 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 COX6B1P3-201ENST00000312310 260 ntBASIC5.27□□□□□ -1.57
LMO4P61968 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LMO4P61968 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LMO4P61968 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 IGLV3-4-201ENST00000432300 244 ntBASIC5.27□□□□□ -1.57
LMO4P61968 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 TPTE2P1-204ENST00000435256 593 ntBASIC5.27□□□□□ -1.57
LMO4P61968 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.27□□□□□ -1.57
LMO4P61968 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 AL133351.3-201ENST00000454998 193 ntBASIC5.27□□□□□ -1.57
LMO4P61968 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.27□□□□□ -1.57
LMO4P61968 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 RN7SL326P-201ENST00000477493 296 ntBASIC5.27□□□□□ -1.57
LMO4P61968 RBBP4P1-201ENST00000502424 1276 ntBASIC5.27□□□□□ -1.57
LMO4P61968 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 ACTR6P1-201ENST00000514311 1104 ntBASIC5.27□□□□□ -1.57
LMO4P61968 RN7SKP35-201ENST00000517210 151 ntBASIC5.27□□□□□ -1.57
LMO4P61968 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.27□□□□□ -1.57
LMO4P61968 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 MRPS21P8-201ENST00000569196 235 ntBASIC5.27□□□□□ -1.57
LMO4P61968 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.27□□□□□ -1.57
LMO4P61968 AP005136.2-201ENST00000583253 1049 ntBASIC5.27□□□□□ -1.57
LMO4P61968 AL445647.2-201ENST00000615170 130 ntBASIC5.27□□□□□ -1.57
LMO4P61968 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.27□□□□□ -1.57
LMO4P61968 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.27□□□□□ -1.57
LMO4P61968 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.27□□□□□ -1.57
LMO4P61968 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LMO4P61968 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMO4P61968 HSPD1P9-201ENST00000420325 1636 ntBASIC5.26□□□□□ -1.57
LMO4P61968 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 AC027575.3-201ENST00000583058 2747 ntBASIC5.26□□□□□ -1.57
LMO4P61968 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 AC127070.3-201ENST00000503695 3263 ntBASIC5.26□□□□□ -1.57
LMO4P61968 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.26□□□□□ -1.57
LMO4P61968 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.26□□□□□ -1.57
LMO4P61968 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.26□□□□□ -1.57
LMO4P61968 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LMO4P61968 AC004386.1-201ENST00000393214 761 ntBASIC5.26□□□□□ -1.57
LMO4P61968 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 DNAJA1P5-201ENST00000440278 943 ntBASIC5.26□□□□□ -1.57
LMO4P61968 EIF5AP4-201ENST00000441206 465 ntBASIC5.26□□□□□ -1.57
LMO4P61968 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 AL157385.1-201ENST00000446973 268 ntBASIC5.26□□□□□ -1.57
LMO4P61968 AC097463.1-201ENST00000447288 481 ntBASIC5.26□□□□□ -1.57
LMO4P61968 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 AC106800.3-201ENST00000511389 308 ntBASIC5.26□□□□□ -1.57
LMO4P61968 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 COX6B1P4-201ENST00000519826 484 ntBASIC5.26□□□□□ -1.57
LMO4P61968 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.26□□□□□ -1.57
LMO4P61968 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.26□□□□□ -1.57
LMO4P61968 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC5.26□□□□□ -1.57
LMO4P61968 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.26□□□□□ -1.57
LMO4P61968 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 AC090826.1-203ENST00000569235 490 ntBASIC5.26□□□□□ -1.57
LMO4P61968 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMO4P61968 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.26□□□□□ -1.57
LMO4P61968 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 AL136097.3-201ENST00000611097 505 ntBASIC5.26□□□□□ -1.57
LMO4P61968 AL118556.2-201ENST00000614375 824 ntBASIC5.26□□□□□ -1.57
LMO4P61968 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LMO4P61968 AL109620.1-201ENST00000618738 1197 ntBASIC5.26□□□□□ -1.57
LMO4P61968 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.26□□□□□ -1.57
LMO4P61968 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.26□□□□□ -1.57
LMO4P61968 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LMO4P61968 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms