Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 AC026951.2-201ENST00000613847 241 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 AC011330.2-201ENST00000621680 635 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AL035425.4-201ENST00000624509 1063 ntBASIC6.23□□□□□ -1.41
CLRN1P58418 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.23□□□□□ -1.41
CLRN1P58418 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CLRN1P58418 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CLRN1P58418 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLRN1P58418 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.23□□□□□ -1.41
CLRN1P58418 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.22□□□□□ -1.41
CLRN1P58418 AP004289.1-201ENST00000436307 2205 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.22□□□□□ -1.41
CLRN1P58418 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 AC133552.3-201ENST00000572236 1869 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CLRN1P58418 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.22□□□□□ -1.41
CLRN1P58418 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CLRN1P58418 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CLRN1P58418 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CLRN1P58418 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.22□□□□□ -1.41
CLRN1P58418 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CLRN1P58418 SNORA79B-201ENST00000410557 148 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.22□□□□□ -1.41
CLRN1P58418 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.22□□□□□ -1.41
CLRN1P58418 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.22□□□□□ -1.41
CLRN1P58418 AC134879.1-201ENST00000426062 394 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 ANXA2P2-201ENST00000435128 1020 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 FABP5P3-201ENST00000437960 408 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 LRRC37A14P-201ENST00000452297 462 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.22□□□□□ -1.41
CLRN1P58418 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.22□□□□□ -1.41
CLRN1P58418 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.22□□□□□ -1.41
CLRN1P58418 TPT1P1-201ENST00000458495 518 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.22□□□□□ -1.41
CLRN1P58418 MTND4LP2-201ENST00000502312 285 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 ASNSP4-201ENST00000511103 447 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 AC108103.1-201ENST00000511286 446 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 RN7SKP242-201ENST00000515967 289 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 OR5M6P-201ENST00000530227 937 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 OR4A21P-201ENST00000532759 944 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 PSMC1P8-201ENST00000536820 1296 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.22□□□□□ -1.41
CLRN1P58418 OR4U1P-201ENST00000554958 912 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.22□□□□□ -1.41
CLRN1P58418 AC026458.1-201ENST00000564330 438 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 MRPL45P2-203ENST00000573318 473 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 AP006587.6-201ENST00000582128 1091 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 AP002802.2-201ENST00000605877 235 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.22□□□□□ -1.41
CLRN1P58418 AC112694.2-201ENST00000623697 768 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.22□□□□□ -1.41
CLRN1P58418 AC026108.1-201ENST00000635444 547 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 AP003399.1-201ENST00000637534 361 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 AL356585.10-201ENST00000641883 123 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CLRN1P58418 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CLRN1P58418 AL034417.4-202ENST00000642135 2236 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 AC007998.4-201ENST00000612496 2533 ntBASIC6.22□□□□□ -1.41
CLRN1P58418 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CLRN1P58418 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLRN1P58418 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.22□□□□□ -1.41
CLRN1P58418 AC005839.1-201ENST00000624148 3213 ntBASIC6.21□□□□□ -1.41
CLRN1P58418 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CLRN1P58418 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CLRN1P58418 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms