Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 IGKV1D-22-201ENST00000518953 324 ntBASIC6.74□□□□□ -1.33
PTPN9P43378 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.74□□□□□ -1.33
PTPN9P43378 RPL41P2-201ENST00000544920 409 ntBASIC6.74□□□□□ -1.33
PTPN9P43378 AC073916.1-201ENST00000545095 130 ntBASIC6.74□□□□□ -1.33
PTPN9P43378 AL121579.2-201ENST00000555466 590 ntBASIC6.74□□□□□ -1.33
PTPN9P43378 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.74□□□□□ -1.33
PTPN9P43378 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.74□□□□□ -1.33
PTPN9P43378 AC024267.2-201ENST00000582737 417 ntBASIC6.74□□□□□ -1.33
PTPN9P43378 TCL6_3.1-201ENST00000619064 137 ntBASIC6.74□□□□□ -1.33
PTPN9P43378 AC005899.6-201ENST00000620729 297 ntBASIC6.74□□□□□ -1.33
PTPN9P43378 TET1P1-201ENST00000426627 2301 ntBASIC6.74□□□□□ -1.33
PTPN9P43378 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
PTPN9P43378 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PTPN9P43378 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PTPN9P43378 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.73□□□□□ -1.33
PTPN9P43378 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.73□□□□□ -1.33
PTPN9P43378 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
PTPN9P43378 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.73□□□□□ -1.33
PTPN9P43378 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.73□□□□□ -1.33
PTPN9P43378 U3.43-201ENST00000410734 213 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 RN7SKP38-201ENST00000410782 309 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.73□□□□□ -1.33
PTPN9P43378 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.73□□□□□ -1.33
PTPN9P43378 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 AL645939.3-201ENST00000435408 225 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC097523.2-201ENST00000435551 652 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 FCF1P7-201ENST00000451185 558 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.73□□□□□ -1.33
PTPN9P43378 SNX18P26-201ENST00000458433 740 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 RN7SL393P-201ENST00000463588 296 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.73□□□□□ -1.33
PTPN9P43378 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 AC093664.1-201ENST00000511779 289 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.73□□□□□ -1.33
PTPN9P43378 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.73□□□□□ -1.33
PTPN9P43378 IGHV1-14-201ENST00000523391 241 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.73□□□□□ -1.33
PTPN9P43378 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.73□□□□□ -1.33
PTPN9P43378 HMGN1P26-201ENST00000558737 303 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.73□□□□□ -1.33
PTPN9P43378 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.73□□□□□ -1.33
PTPN9P43378 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.73□□□□□ -1.33
PTPN9P43378 MIR5010-201ENST00000582846 120 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC233702.7-202ENST00000582941 211 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC090616.1-201ENST00000583895 447 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.73□□□□□ -1.33
PTPN9P43378 AL390877.1-201ENST00000605704 214 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC068726.1-201ENST00000610993 341 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 MIR6885-201ENST00000612241 66 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
PTPN9P43378 AC243960.7-201ENST00000623532 707 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.73□□□□□ -1.33
PTPN9P43378 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.73□□□□□ -1.33
PTPN9P43378 AC006213.6-201ENST00000623722 4179 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PTPN9P43378 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PTPN9P43378 AL353743.3-201ENST00000442109 1468 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 AC217777.1-201ENST00000570034 1471 ntBASIC6.73□□□□□ -1.33
PTPN9P43378 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTPN9P43378 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTPN9P43378 AC099654.3-201ENST00000447087 1546 ntBASIC6.72□□□□□ -1.33
PTPN9P43378 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PTPN9P43378 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTPN9P43378 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.72□□□□□ -1.33
PTPN9P43378 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTPN9P43378 DOCK11P1-201ENST00000553480 5932 ntBASIC6.72□□□□□ -1.33
PTPN9P43378 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.72□□□□□ -1.33
PTPN9P43378 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PTPN9P43378 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTPN9P43378 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PTPN9P43378 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.72□□□□□ -1.33
PTPN9P43378 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PTPN9P43378 AL353626.3-201ENST00000413399 657 ntBASIC6.72□□□□□ -1.33
PTPN9P43378 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PTPN9P43378 AL031681.1-201ENST00000443304 400 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms