Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC006509.1-201ENST00000420788 634 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 ZNF736P7Y-201ENST00000425158 820 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC239367.3-201ENST00000428996 814 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 NPM1P23-201ENST00000440193 849 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 ELOCP13-201ENST00000443934 329 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 RPS3AP49-201ENST00000472161 790 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC092902.1-201ENST00000486999 259 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 RN7SL37P-201ENST00000490461 307 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AL390198.2-201ENST00000510553 222 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC093510.2-201ENST00000562820 896 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 RN7SL66P-201ENST00000582099 264 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 Z99289.3-201ENST00000605586 594 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC010333.3-201ENST00000615100 402 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC022306.2-201ENST00000617563 647 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC026585.1-201ENST00000619582 524 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC211486.4-201ENST00000621495 113 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 TSHZ2-205ENST00000626626 670 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 RBPJP6-201ENST00000411556 1431 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 MAPK10-323ENST00000641493 3207 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC005261.6-201ENST00000623072 1387 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC138915.4-201ENST00000565549 4147 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 RNA5SP321-201ENST00000362722 111 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 MIR122-201ENST00000385044 85 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AL033519.1-201ENST00000407266 307 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 RNA5SP155-201ENST00000411154 129 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC073143.1-201ENST00000436316 395 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 XKRYP6-201ENST00000440468 1116 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 XKRYP3-201ENST00000442113 1116 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 PA2G4P1-201ENST00000442248 1197 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 PFN1P11-201ENST00000445829 389 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AL390728.3-201ENST00000452704 270 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC099340.1-201ENST00000475247 599 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 RN7SL259P-201ENST00000478499 253 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC023538.1-201ENST00000534576 736 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC007068.2-201ENST00000543168 395 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 CSNK1A1P1-202ENST00000563423 981 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 ARGFXP2-201ENST00000579304 949 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC091133.5-201ENST00000603088 301 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC093424.1-201ENST00000604999 338 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC096586.1-201ENST00000610267 561 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC008121.2-201ENST00000614647 523 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC034229.6-201ENST00000623704 224 ntBASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CDK5RAP1Q96SZ6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms