Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL135999.3-201ENST00000610501 812 ntBASIC7.07□□□□□ -1.28
VCPP55072 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 AL122023.1-201ENST00000622847 530 ntBASIC7.07□□□□□ -1.28
VCPP55072 AC006328.2-201ENST00000623198 397 ntBASIC7.07□□□□□ -1.28
VCPP55072 AC012005.2-201ENST00000624333 397 ntBASIC7.07□□□□□ -1.28
VCPP55072 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 AC093829.1-201ENST00000506662 1618 ntBASIC7.07□□□□□ -1.28
VCPP55072 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.07□□□□□ -1.28
VCPP55072 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
VCPP55072 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.06□□□□□ -1.28
VCPP55072 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
VCPP55072 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
VCPP55072 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.06□□□□□ -1.28
VCPP55072 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 AC096537.2-201ENST00000413707 714 ntBASIC7.06□□□□□ -1.28
VCPP55072 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.06□□□□□ -1.28
VCPP55072 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.06□□□□□ -1.28
VCPP55072 BMS1P13-201ENST00000417301 885 ntBASIC7.06□□□□□ -1.28
VCPP55072 AC099782.1-201ENST00000425889 474 ntBASIC7.06□□□□□ -1.28
VCPP55072 AC108479.1-201ENST00000431142 427 ntBASIC7.06□□□□□ -1.28
VCPP55072 AL645939.3-201ENST00000435408 225 ntBASIC7.06□□□□□ -1.28
VCPP55072 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.06□□□□□ -1.28
VCPP55072 AC092106.2-201ENST00000436597 487 ntBASIC7.06□□□□□ -1.28
VCPP55072 BMS1P10-201ENST00000443754 1120 ntBASIC7.06□□□□□ -1.28
VCPP55072 SUMO2P1-206ENST00000445436 284 ntBASIC7.06□□□□□ -1.28
VCPP55072 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.06□□□□□ -1.28
VCPP55072 MEF2AP1-201ENST00000454867 863 ntBASIC7.06□□□□□ -1.28
VCPP55072 AC084754.1-201ENST00000463466 464 ntBASIC7.06□□□□□ -1.28
VCPP55072 RN7SL174P-201ENST00000475578 289 ntBASIC7.06□□□□□ -1.28
VCPP55072 RN7SL382P-201ENST00000482631 282 ntBASIC7.06□□□□□ -1.28
VCPP55072 RPS4XP14-201ENST00000493072 781 ntBASIC7.06□□□□□ -1.28
VCPP55072 AC027667.1-201ENST00000545814 304 ntBASIC7.06□□□□□ -1.28
VCPP55072 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.06□□□□□ -1.28
VCPP55072 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.06□□□□□ -1.28
VCPP55072 CTSLP2-201ENST00000580501 394 ntBASIC7.06□□□□□ -1.28
VCPP55072 GLYATL1P2-202ENST00000588046 902 ntBASIC7.06□□□□□ -1.28
VCPP55072 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.06□□□□□ -1.28
VCPP55072 AC124916.2-201ENST00000604416 224 ntBASIC7.06□□□□□ -1.28
VCPP55072 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.06□□□□□ -1.28
VCPP55072 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.06□□□□□ -1.28
VCPP55072 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
VCPP55072 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VCPP55072 AL451064.2-201ENST00000623514 1654 ntBASIC7.06□□□□□ -1.28
VCPP55072 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.06□□□□□ -1.28
VCPP55072 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
VCPP55072 CIR1P2-201ENST00000514821 1342 ntBASIC7.05□□□□□ -1.28
VCPP55072 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.05□□□□□ -1.28
VCPP55072 CDY5P-201ENST00000411487 1580 ntBASIC7.05□□□□□ -1.28
VCPP55072 CDY9P-201ENST00000451397 1580 ntBASIC7.05□□□□□ -1.28
VCPP55072 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
VCPP55072 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VCPP55072 RNA5SP140-201ENST00000364524 92 ntBASIC7.05□□□□□ -1.28
VCPP55072 RN7SKP81-201ENST00000365603 331 ntBASIC7.05□□□□□ -1.28
VCPP55072 AC079355.1-201ENST00000421770 223 ntBASIC7.05□□□□□ -1.28
VCPP55072 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 AC003989.1-201ENST00000434569 565 ntBASIC7.05□□□□□ -1.28
VCPP55072 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.05□□□□□ -1.28
VCPP55072 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 AC124945.1-201ENST00000485133 188 ntBASIC7.05□□□□□ -1.28
VCPP55072 RN7SL187P-201ENST00000495587 303 ntBASIC7.05□□□□□ -1.28
VCPP55072 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.05□□□□□ -1.28
VCPP55072 AC073581.1-201ENST00000519036 575 ntBASIC7.05□□□□□ -1.28
VCPP55072 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.05□□□□□ -1.28
VCPP55072 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 AC004232.1-201ENST00000571388 208 ntBASIC7.05□□□□□ -1.28
VCPP55072 AC004232.2-201ENST00000574245 821 ntBASIC7.05□□□□□ -1.28
VCPP55072 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.05□□□□□ -1.28
VCPP55072 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.05□□□□□ -1.28
VCPP55072 AC004908.1-201ENST00000606572 541 ntBASIC7.05□□□□□ -1.28
VCPP55072 AC108865.2-201ENST00000606881 432 ntBASIC7.05□□□□□ -1.28
VCPP55072 AL512624.1-201ENST00000613638 469 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms