Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 SETP3-201ENST00000581726 813 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC061975.3-201ENST00000583209 244 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC012640.3-201ENST00000607847 430 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC097504.2-201ENST00000608088 454 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC027449.1-201ENST00000608890 407 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 OR7M1P-201ENST00000608946 533 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC084036.1-201ENST00000609190 508 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC048344.4-201ENST00000619744 527 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC120057.5-201ENST00000623840 154 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 MAPK10-350ENST00000641777 965 ntBASIC6.24□□□□□ -1.41
SNX18Q96RF0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX18Q96RF0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SNX18Q96RF0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 RNA5SP429-201ENST00000363688 109 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 RNA5SP302-201ENST00000364896 100 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 VDAC1P10-201ENST00000416715 891 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 NME1P1-201ENST00000420914 382 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC023141.6-201ENST00000429418 337 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AL392003.1-201ENST00000434394 243 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 MRPS33P4-201ENST00000434892 317 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 RPL14P5-201ENST00000436474 730 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 LSM3P3-201ENST00000436601 306 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 RPL21P33-201ENST00000444831 484 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 REG1CP-206ENST00000447469 496 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 SCDP1-201ENST00000455244 1081 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 TREML3P-201ENST00000457327 501 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 RN7SL456P-201ENST00000469290 295 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC091982.1-202ENST00000473923 343 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 RN7SL165P-201ENST00000477476 291 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 MYL6P4-201ENST00000477911 453 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC112184.1-201ENST00000505179 312 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC021220.1-201ENST00000507445 630 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 SSU72P6-201ENST00000532644 488 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC092375.1-201ENST00000550410 637 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC011497.2-201ENST00000600255 639 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC007255.2-201ENST00000604053 631 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC091768.1-201ENST00000609258 930 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AL161931.1-201ENST00000612768 246 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC073857.1-201ENST00000625082 1054 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC243725.1-201ENST00000637164 436 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC011471.4-201ENST00000638271 216 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC099654.15-201ENST00000639802 509 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms