Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC083862.1-201ENST00000427378 1242 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.78□□□□□ -1.32
PTPN9P43378 AL512637.1-201ENST00000439523 1231 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.78□□□□□ -1.32
PTPN9P43378 CCNJP2-201ENST00000457810 1163 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 NPM1P27-201ENST00000502784 830 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 AC091965.3-201ENST00000506236 208 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.78□□□□□ -1.32
PTPN9P43378 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.78□□□□□ -1.32
PTPN9P43378 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.78□□□□□ -1.32
PTPN9P43378 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.78□□□□□ -1.32
PTPN9P43378 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 MIR4301-201ENST00000577203 66 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 AC067852.5-201ENST00000589299 310 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 AC019257.2-201ENST00000605539 497 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PTPN9P43378 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.78□□□□□ -1.32
PTPN9P43378 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.78□□□□□ -1.32
PTPN9P43378 RPL31P11-201ENST00000426558 1558 ntBASIC6.78□□□□□ -1.32
PTPN9P43378 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
PTPN9P43378 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
PTPN9P43378 AC233968.1-201ENST00000611212 1300 ntBASIC6.77□□□□□ -1.32
PTPN9P43378 AC005702.3-201ENST00000585345 1447 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 ZNF402P-201ENST00000404435 3100 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PTPN9P43378 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.77□□□□□ -1.33
PTPN9P43378 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PTPN9P43378 AP000547.3-204ENST00000588548 2523 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PTPN9P43378 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PTPN9P43378 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.77□□□□□ -1.33
PTPN9P43378 MRPS21P5-201ENST00000417885 231 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 AL139184.1-202ENST00000422303 222 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 AC097721.1-201ENST00000427150 1253 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.77□□□□□ -1.33
PTPN9P43378 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.77□□□□□ -1.33
PTPN9P43378 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.77□□□□□ -1.33
PTPN9P43378 AL034369.1-201ENST00000453808 477 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.77□□□□□ -1.33
PTPN9P43378 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.77□□□□□ -1.33
PTPN9P43378 AC139713.1-202ENST00000512366 460 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PTPN9P43378 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.77□□□□□ -1.33
PTPN9P43378 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.77□□□□□ -1.33
PTPN9P43378 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.77□□□□□ -1.33
PTPN9P43378 EIF1AXP2-201ENST00000555940 413 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.77□□□□□ -1.33
PTPN9P43378 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.77□□□□□ -1.33
PTPN9P43378 AL683813.2-201ENST00000605245 502 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PTPN9P43378 AC107905.1-201ENST00000616204 426 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
PTPN9P43378 AP003400.2-201ENST00000624036 666 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 CLUHP10-201ENST00000631979 980 ntBASIC6.77□□□□□ -1.33
PTPN9P43378 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.77□□□□□ -1.33
PTPN9P43378 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
PTPN9P43378 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PTPN9P43378 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PTPN9P43378 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.77□□□□□ -1.33
PTPN9P43378 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PTPN9P43378 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.77□□□□□ -1.33
PTPN9P43378 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PTPN9P43378 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 AC079248.1-201ENST00000427568 1546 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 SAGE3P-201ENST00000619800 1635 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
PTPN9P43378 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.76□□□□□ -1.33
PTPN9P43378 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
PTPN9P43378 AC110373.1-201ENST00000505994 3505 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 RNU1-84P-201ENST00000365447 164 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 VIM2P-201ENST00000402383 1294 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 AL033519.1-201ENST00000407266 307 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 UBTFL2-201ENST00000411859 1191 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.76□□□□□ -1.33
PTPN9P43378 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.76□□□□□ -1.33
PTPN9P43378 MED28P4-201ENST00000433137 572 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PTPN9P43378 PPIAP32-201ENST00000449940 472 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 AL445991.1-201ENST00000450381 475 ntBASIC6.76□□□□□ -1.33
PTPN9P43378 RN7SL502P-201ENST00000481857 290 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms