Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCL1P22362 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCL1P22362 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL1P22362 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL1P22362 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL1P22362 RPL7L1P3-201ENST00000455249 689 ntBASIC5.49□□□□□ -1.53
CCL1P22362 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL1P22362 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.49□□□□□ -1.53
CCL1P22362 RN7SL350P-201ENST00000492591 299 ntBASIC5.49□□□□□ -1.53
CCL1P22362 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL1P22362 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.49□□□□□ -1.53
CCL1P22362 AP002004.1-206ENST00000532441 876 ntBASIC5.49□□□□□ -1.53
CCL1P22362 RPA2P3-201ENST00000533268 770 ntBASIC5.49□□□□□ -1.53
CCL1P22362 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.49□□□□□ -1.53
CCL1P22362 MRPL45P2-203ENST00000573318 473 ntBASIC5.49□□□□□ -1.53
CCL1P22362 AL512430.4-201ENST00000603085 613 ntBASIC5.49□□□□□ -1.53
CCL1P22362 AC073046.2-201ENST00000604756 527 ntBASIC5.49□□□□□ -1.53
CCL1P22362 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL1P22362 U1.25-201ENST00000614085 162 ntBASIC5.49□□□□□ -1.53
CCL1P22362 U1.34-201ENST00000618578 162 ntBASIC5.49□□□□□ -1.53
CCL1P22362 U1.31-201ENST00000620022 160 ntBASIC5.49□□□□□ -1.53
CCL1P22362 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.49□□□□□ -1.53
CCL1P22362 SMG1P5-202ENST00000529428 4219 ntBASIC5.49□□□□□ -1.53
CCL1P22362 SMG1P2-201ENST00000566127 4221 ntBASIC5.49□□□□□ -1.53
CCL1P22362 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL1P22362 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.49□□□□□ -1.53
CCL1P22362 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
CCL1P22362 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.49□□□□□ -1.53
CCL1P22362 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCL1P22362 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
CCL1P22362 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 AC009831.5-201ENST00000624000 3189 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AL136984.1-201ENST00000607611 1893 ntBASIC5.48□□□□□ -1.53
CCL1P22362 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCL1P22362 MIR433-201ENST00000384837 93 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 OR9A1P-202ENST00000484361 945 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AC018645.1-201ENST00000505003 109 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AC010343.2-201ENST00000510162 224 ntBASIC5.48□□□□□ -1.53
CCL1P22362 SCARNA11.1-201ENST00000516918 132 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 TPRX1P1-201ENST00000557620 319 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AC023968.1-201ENST00000560719 475 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AC007494.1-201ENST00000562293 760 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.48□□□□□ -1.53
CCL1P22362 SYPL1P2-201ENST00000582878 727 ntBASIC5.48□□□□□ -1.53
CCL1P22362 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.48□□□□□ -1.53
CCL1P22362 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.48□□□□□ -1.53
CCL1P22362 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 MIR7159-201ENST00000620587 66 ntBASIC5.48□□□□□ -1.53
CCL1P22362 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 AC087269.2-201ENST00000641764 975 ntBASIC5.48□□□□□ -1.53
CCL1P22362 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CCL1P22362 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCL1P22362 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.48□□□□□ -1.53
CCL1P22362 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.47□□□□□ -1.53
CCL1P22362 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCL1P22362 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCL1P22362 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCL1P22362 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCL1P22362 AC010329.1-201ENST00000593903 8328 ntBASIC5.47□□□□□ -1.53
CCL1P22362 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCL1P22362 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCL1P22362 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCL1P22362 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.47□□□□□ -1.53
CCL1P22362 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCL1P22362 AC096921.2-201ENST00000561507 1916 ntBASIC5.47□□□□□ -1.53
CCL1P22362 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCL1P22362 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCL1P22362 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCL1P22362 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms