Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX3Q99909 AL353626.3-201ENST00000413399 657 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX3Q99909 CHCHD4P5-201ENST00000436684 427 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 BX005266.3-201ENST00000443013 1075 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 AC236972.4-201ENST00000458091 963 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 GAPDHP53-201ENST00000458397 924 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 RPL34P34-201ENST00000465389 354 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AP005202.1-201ENST00000489915 867 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 RPS10P20-201ENST00000494130 463 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AC063943.2-201ENST00000495697 534 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AC146944.3-201ENST00000509969 371 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.69□□□□□ -1.5
SSX3Q99909 IGKV2-19-201ENST00000518132 283 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 OR7E154P-201ENST00000525174 932 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.69□□□□□ -1.5
SSX3Q99909 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 AC089984.3-201ENST00000552838 363 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AL109628.1-201ENST00000556877 366 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.69□□□□□ -1.5
SSX3Q99909 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX3Q99909 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 AC067852.5-201ENST00000589299 310 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX3Q99909 RN7SL126P-201ENST00000616400 299 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 AC140479.4-205ENST00000636339 820 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
SSX3Q99909 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX3Q99909 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SSX3Q99909 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
SSX3Q99909 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 AC105749.1-201ENST00000631338 2008 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX3Q99909 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX3Q99909 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SSX3Q99909 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SSX3Q99909 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 AP001284.1-201ENST00000528393 2118 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 RNA5SP512-201ENST00000364550 120 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX3Q99909 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SSX3Q99909 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX3Q99909 PRUNEP1-201ENST00000425846 705 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 TRGV7-201ENST00000427089 353 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 BMP6P1-201ENST00000431230 679 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX3Q99909 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX3Q99909 BMS1P11-201ENST00000442351 885 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 SDHCP3-201ENST00000445371 506 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 PRDX1P1-201ENST00000449329 596 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 BMS1P9-201ENST00000457640 885 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX3Q99909 AC079193.1-201ENST00000460497 588 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX3Q99909 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX3Q99909 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX3Q99909 RN7SKP67-201ENST00000515905 235 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX3Q99909 AC021820.1-201ENST00000525564 808 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX3Q99909 OR9L1P-201ENST00000529493 933 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX3Q99909 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX3Q99909 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX3Q99909 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX3Q99909 MIR3135A-201ENST00000578460 77 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 AC100832.2-201ENST00000582080 776 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX3Q99909 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX3Q99909 RPS27AP19-201ENST00000597285 458 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 AC063962.1-201ENST00000608199 521 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX3Q99909 AC008626.2-201ENST00000624425 248 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms