Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 E2F6P3-201ENST00000441743 743 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 GAPDHP33-201ENST00000443168 1013 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 RPS3AP49-201ENST00000472161 790 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AC023080.1-201ENST00000551663 931 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AL162632.2-201ENST00000553933 399 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 RN7SL657P-201ENST00000582431 293 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AL078624.2-201ENST00000605063 554 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AC093635.1-201ENST00000609028 555 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AC090220.1-201ENST00000593078 1699 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 NCOA4P2-201ENST00000340589 1813 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 AC007159.1-201ENST00000566529 4706 ntBASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF439Q8NDP4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 STAG3L4-201ENST00000352103 530 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 MIR431-201ENST00000385266 114 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL136100.1-201ENST00000407696 330 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL353626.3-201ENST00000413399 657 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL929472.1-201ENST00000417484 429 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 UBBP5-201ENST00000446970 266 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 TVP23CP1-201ENST00000450317 639 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AC009244.1-201ENST00000450566 258 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 RPL36AP55-201ENST00000454114 305 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 RN7SL372P-201ENST00000461982 298 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AC008868.1-201ENST00000509786 737 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 SCARNA5-201ENST00000516201 276 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 RN7SKP196-201ENST00000516267 345 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AC008429.2-201ENST00000523057 864 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 KCTD9P4-201ENST00000526766 1166 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL583832.1-201ENST00000603227 784 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL512413.1-201ENST00000606489 382 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AC073488.9-201ENST00000631601 754 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AL121936.2-201ENST00000641935 662 ntBASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
ZNF439Q8NDP4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 AC009220.2-201ENST00000489759 1751 ntBASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF439Q8NDP4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms