Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL354714.5-201ENST00000450131 590 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC009244.1-201ENST00000450566 258 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC010878.1-201ENST00000456500 1047 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 RN7SL492P-201ENST00000460700 295 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC093325.1-201ENST00000508378 326 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC096661.1-201ENST00000515870 822 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC130364.2-201ENST00000528639 604 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 PHBP2-201ENST00000532859 806 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC008126.1-201ENST00000549019 480 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 ACTG1P15-201ENST00000570019 1063 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 EIF4A3P1-201ENST00000578499 647 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 RPS27AP19-201ENST00000597285 458 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 MIR6774-201ENST00000614651 70 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AL354702.2-202ENST00000641481 890 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC104837.1-201ENST00000444644 1587 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC007159.1-201ENST00000566529 4706 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC232271.1-201ENST00000602455 2715 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 AC126474.2-201ENST00000623268 1750 ntBASIC6.51□□□□□ -1.37
VMP1Q96GC9 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VMP1Q96GC9 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.51□□□□□ -1.37
VMP1Q96GC9 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VMP1Q96GC9 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VMP1Q96GC9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VMP1Q96GC9 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AL121949.2-201ENST00000403446 1548 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 CDY19P-201ENST00000411668 1613 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 CDY18P-201ENST00000438294 1609 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 UGT2B24P-201ENST00000514441 1597 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 OR56A4-201ENST00000330728 1209 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 PSMC1P2-201ENST00000423961 1204 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AL034399.1-201ENST00000451535 380 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 DEFB109A-201ENST00000482450 265 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC026774.2-201ENST00000513990 1098 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 RNA5SP96-201ENST00000516041 107 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 OR7E154P-201ENST00000525174 932 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC069240.2-201ENST00000550242 609 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AL591222.2-201ENST00000604443 754 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 MIR6070-201ENST00000613967 103 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC102941.1-201ENST00000567616 1537 ntBASIC6.5□□□□□ -1.37
VMP1Q96GC9 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VMP1Q96GC9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.5□□□□□ -1.37
VMP1Q96GC9 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms