Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC084121.1-201ENST00000533882 835 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 SNRPGP1-201ENST00000553864 222 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 BUB1P1-201ENST00000603541 607 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 AL354950.1-201ENST00000614150 568 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 OR1N1-202ENST00000619659 939 ntBASIC7.73□□□□□ -1.17
HLA-DOAP06340 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HLA-DOAP06340 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HLA-DOAP06340 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 AL391419.1-201ENST00000398901 1275 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 MTND3P20-201ENST00000407663 186 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 OSTCP4-201ENST00000424397 449 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 MTCO3P17-201ENST00000443775 513 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 RPL5P10-201ENST00000445207 894 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 OR13C1P-201ENST00000457612 963 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 RN7SL561P-201ENST00000488553 281 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 MAST4-IT1-201ENST00000514241 658 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 TOMM20P1-201ENST00000534518 427 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 AC005632.2-201ENST00000564271 828 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 AL499605.1-201ENST00000604628 403 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 AC025171.4-201ENST00000607250 1047 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 AC239803.2-201ENST00000610161 430 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 MIR6071-201ENST00000616741 78 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
HLA-DOAP06340 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 AL139384.2-201ENST00000613809 3590 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 AC092646.2-201ENST00000431242 2095 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 NEK2P4-201ENST00000425793 1329 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 AL512310.3-201ENST00000547023 1335 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HLA-DOAP06340 AC011592.1-201ENST00000624647 3634 ntBASIC7.72□□□□□ -1.17
HLA-DOAP06340 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
HLA-DOAP06340 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
HLA-DOAP06340 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.71□□□□□ -1.17
HLA-DOAP06340 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.71□□□□□ -1.17
HLA-DOAP06340 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-DOAP06340 ASNSP6-201ENST00000592770 1618 ntBASIC7.71□□□□□ -1.17
HLA-DOAP06340 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.71□□□□□ -1.17
HLA-DOAP06340 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-DOAP06340 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
HLA-DOAP06340 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC007485.2-201ENST00000623493 1667 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 RNA5SP115-201ENST00000411160 107 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC117434.1-201ENST00000419971 836 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC003989.1-201ENST00000434569 565 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 POU5F1P5-201ENST00000445059 658 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 RBMY2AP-201ENST00000445405 1157 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 RBMY2CP-201ENST00000448575 1157 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 RBMY2DP-202ENST00000448881 1157 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 PFN1P8-201ENST00000497012 543 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms