Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 SNX18P3-202ENST00000565670 1750 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 AC006213.6-201ENST00000623722 4179 ntBASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHBDD3Q9Y3P4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 MTCO1P25-201ENST00000414449 1799 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC097721.1-201ENST00000427150 1253 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 RPS7P4-201ENST00000444127 582 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 GOLGA5P1-201ENST00000507317 980 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 IGLV3-6-201ENST00000523937 250 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 SNRPCP6-201ENST00000528310 210 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC090241.1-201ENST00000587732 621 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC097467.4-201ENST00000605504 141 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC023206.1-201ENST00000605824 298 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC006328.2-201ENST00000623198 397 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AP003108.4-201ENST00000623917 878 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC012005.2-201ENST00000624333 397 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC027279.4-201ENST00000624371 2072 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 AC067942.1-201ENST00000488045 1493 ntBASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.76□□□□□ -1.49
RHBDD3Q9Y3P4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 DOCK11P1-201ENST00000553480 5932 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 RNA5SP152-201ENST00000365184 110 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 YWHAZP5-201ENST00000419975 730 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 RPS7P12-201ENST00000422385 582 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 RPS10P21-201ENST00000430654 475 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AL590399.4-201ENST00000436561 601 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 CHCHD4P5-201ENST00000436684 427 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 PFN1P11-201ENST00000445829 389 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 UOX-201ENST00000471089 899 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 RPL7AP23-201ENST00000482625 776 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 RPL7AP30-201ENST00000482859 796 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC134698.1-201ENST00000511619 643 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC114940.1-201ENST00000512162 1265 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 PHBP2-201ENST00000532859 806 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC103855.4-201ENST00000533158 265 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 RN7SL270P-201ENST00000579643 281 ntBASIC5.75□□□□□ -1.49
RHBDD3Q9Y3P4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms