Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Speer3W4VSP1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.4■□□□□ 0.38
Speer3W4VSP1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.4■□□□□ 0.38
Speer3W4VSP1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.4■□□□□ 0.38
Speer3W4VSP1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Speer3W4VSP1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
Speer3W4VSP1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Speer3W4VSP1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.38■□□□□ 0.37
Speer3W4VSP1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.38■□□□□ 0.37
Speer3W4VSP1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Speer3W4VSP1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.38■□□□□ 0.37
Speer3W4VSP1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.38■□□□□ 0.37
Speer3W4VSP1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Speer3W4VSP1 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.37■□□□□ 0.37
Speer3W4VSP1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Gm29257-201ENSMUST00000186115 639 ntBASIC17.37■□□□□ 0.37
Speer3W4VSP1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.37■□□□□ 0.37
Speer3W4VSP1 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.37■□□□□ 0.37
Speer3W4VSP1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.37■□□□□ 0.37
Speer3W4VSP1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Speer3W4VSP1 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.37■□□□□ 0.37
Speer3W4VSP1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms